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PLA2G2D phospholipase A2 group IID [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100671475, updated on 11-Apr-2024

Summary

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Gene symbol
PLA2G2D
Gene description
phospholipase A2 group IID
See related
EnsemblRapid:ENSLAFG00000040865
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human all
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 3 NC_087344.1 (55035352..55051184, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573446.1 (2077880..2093408)

Chromosome 3 - NC_087344.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2, membrane associated-like Neighboring gene phospholipase A2 group V Neighboring gene phospholipase A2 group IIF Neighboring gene phospholipase A2 group IIC

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonic acid secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group IID secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087344.1 Reference mLoxAfr1.hap2

    Range
    55035352..55051184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064281406.1 → XP_064137476.1  group IID secretory phospholipase A2 isoform X2

  2. XM_023551984.2 → XP_023407752.1  group IID secretory phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    G3SLG8
    Conserved Domains (1) summary
    cd00125
    Location:1 → 111
    PLA2c; Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent ...

  3. XM_003413120.3 → XP_003413168.1  group IID secretory phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    G3SLG8
    Conserved Domains (1) summary
    cd00125
    Location:23 → 138
    PLA2c; PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a ...

  4. XM_023551982.2 → XP_023407750.1  group IID secretory phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    G3SLG8
    Related
    ENSLAFP00000041134.1, ENSLAFT00000044869.1
    Conserved Domains (1) summary
    cd00125
    Location:23 → 138
    PLA2c; PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a ...

  5. XM_023551983.2 → XP_023407751.1  group IID secretory phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    G3SLG8
    Conserved Domains (1) summary
    cd00125
    Location:23 → 138
    PLA2c; PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a ...
Nucleotide Protein
Heading Accession and Version

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