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LOC100665050 cholesterol side-chain cleavage enzyme, mitochondrial [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100665050, updated on 3-Dec-2024
Gene symbol
LOC100665050
Gene description
cholesterol side-chain cleavage enzyme, mitochondrial
See related
EnsemblRapid:ENSLAFG00000008555
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
all
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See LOC100665050 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 13 NC_087354.1 (41613606..41631633)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573448.1 (5686609..5704589, complement)

Chromosome 13 - NC_087354.1Genomic Context describing neighboring genes Neighboring gene semaphorin 7A (JohnMiltonHagen blood group) Neighboring gene uncharacterized LOC111751618 Neighboring gene coiled-coil domain containing 33 Neighboring gene signaling receptor and transporter of retinol STRA6

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol monooxygenase (side-chain-cleaving) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C21-steroid hormone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to peptide hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortisol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucocorticoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cholesterol side-chain cleavage enzyme, mitochondrial

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087354.1 Reference mLoxAfr1.hap2

    Range
    41613606..41631633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003413934.3 → XP_003413982.2  cholesterol side-chain cleavage enzyme, mitochondrial

    UniProtKB/TrEMBL
    G3T218
    Related
    ENSLAFP00000007182.4, ENSLAFT00000008552.4
Nucleotide Protein
Heading Accession and Version

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