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PRKCD protein kinase C delta [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100659245, updated on 11-Apr-2024

Summary

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Gene symbol
PRKCD
Gene description
protein kinase C delta
See related
EnsemblRapid:ENSLAFG00000015864
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 22 NC_087363.1 (19827048..19858944, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573432.1 (14445688..14476682, complement)

Chromosome 22 - NC_087363.1Genomic Context describing neighboring genes Neighboring gene decapping mRNA 1A Neighboring gene transketolase Neighboring gene uncharacterized LOC111750586 Neighboring gene RFT1 homolog Neighboring gene Scm like with four mbt domains 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diacylglycerol-dependent serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C delta type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087363.1 Reference mLoxAfr1.hap2

    Range
    19827048..19858944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064274388.1 → XP_064130458.1  protein kinase C delta type isoform X1

    Related
    ENSLAFP00000013309.3, ENSLAFT00000015869.3

  2. XM_064274389.1 → XP_064130459.1  protein kinase C delta type isoform X1

  3. XM_010589743.3 → XP_010588045.1  protein kinase C delta type isoform X1

    UniProtKB/TrEMBL
    G3TVL9
    Conserved Domains (3) summary
    cd05620
    Location:359 → 674
    STKc_nPKC_delta; Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta
    smart00220
    Location:355 → 609
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    pfam00130
    Location:231 → 283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)

  4. XM_003410055.4 → XP_003410103.1  protein kinase C delta type isoform X2

    UniProtKB/TrEMBL
    G3TVL9, G5E721
    Conserved Domains (3) summary
    cd05620
    Location:353 → 668
    STKc_nPKC_delta; Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta
    smart00220
    Location:349 → 603
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    pfam00130
    Location:231 → 283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
Nucleotide Protein
Heading Accession and Version

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