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SNX29P1 sorting nexin 29 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100652781, updated on 25-Jan-2022

Summary

Official Symbol
SNX29P1provided by HGNC
Official Full Name
sorting nexin 29 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:31913
See related
AllianceGenome:HGNC:31913
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RUNDC2B; RUNDC2L
Expression
Biased expression in lymph node (RPKM 22.4), appendix (RPKM 6.3) and 4 other tissues See more
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Genomic context

See SNX29P1 in Genome Data Viewer
Location:
16p12.2
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (21349363..21385933)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (21360684..21397254)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene crystallin mu Neighboring gene uncharacterized LOC105371125 Neighboring gene CRYM antisense RNA 1 Neighboring gene nuclear pore complex interacting protein family member B3 Neighboring gene uncharacterized LOC100190986

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • Putative RUN domain-containing protein 2B
  • RUN domain containing 2B
  • RUNDC2-like protein
  • Sorting nexin 29 protein pseudogene 1

Clone Names

  • MGC52410

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045011.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008740, DR003051

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    21349363..21385933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_017852933.1 Reference GRCh38.p13 PATCHES

    Range
    173044..209599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012391.1: Suppressed sequence

    Description
    NM_001012391.1: This RefSeq was permanently suppressed because the CDS was partial.
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