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NNT-AS1 NNT antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100652772, updated on 13-May-2022

Summary

Official Symbol
NNT-AS1provided by HGNC
Official Full Name
NNT antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:49005
See related
AllianceGenome:HGNC:49005
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in heart (RPKM 7.2), brain (RPKM 5.6) and 24 other tissues See more
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Genomic context

See NNT-AS1 in Genome Data Viewer
Location:
5p12
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (43573185..43603230, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (43826836..43856862, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (43573287..43603332, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene chromosome 5 open reading frame 34 Neighboring gene uncharacterized LOC124900190 Neighboring gene poly(A) binding protein interacting protein 1 Neighboring gene adenosylmethionine decarboxylase 1 pseudogene 3 Neighboring gene nicotinamide nucleotide transhydrogenase Neighboring gene Sharpr-MPRA regulatory region 11344 Neighboring gene ribosomal protein L29 pseudogene 12

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • RP11-159F24.1

Clone Names

  • FLJ31207

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_073113.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114956, AK055769, AL691886, BC012288, DA630653, DB499358, HY014991

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    43573185..43603230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    43826836..43856862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)