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LOC100650346 homeobox protein Hox-A3 [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100650346, updated on 30-Nov-2023

Summary

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Gene symbol
LOC100650346
Gene description
homeobox protein Hox-A3
See related
EnsemblRapid:ENSBTSG00005027805
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
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Genomic context

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See LOC100650346 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 18 NC_063286.1 (3384240..3397797)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B18 NC_015779.1 (1585586..1598652)

Chromosome 18 - NC_063286.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105666684 Neighboring gene uncharacterized LOC125386908 Neighboring gene uncharacterized LOC100643468 Neighboring gene uncharacterized LOC105666686 Neighboring gene uncharacterized LOC110120056

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites. Schoonvaere K, et al. Front Microbiol, 2018. PMID 29491849, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063286.1 Reference iyBomTerr1.2

    Range
    3384240..3397797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012318239.3 → XP_012173629.2  homeobox protein Hox-A3

    UniProtKB/TrEMBL
    A0A9B2JY27
    Related
    ENSBTSP00005068393.1, ENSBTST00005047749.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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