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LOC100649440 germ cell nuclear acidic protein [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100649440, updated on 1-Oct-2024
Gene symbol
LOC100649440
Gene description
germ cell nuclear acidic protein
See related
EnsemblRapid:ENSBTSG00005027523
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
honey bee all
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See LOC100649440 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 2 NC_063270.1 (12469029..12476129)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B02 NC_015763.1 (6751656..6756568)

Chromosome 2 - NC_063270.1Genomic Context describing neighboring genes Neighboring gene neuropeptides capa receptor Neighboring gene neuropeptides capa receptor-like Neighboring gene yemanuclein Neighboring gene probable ATP-dependent RNA helicase ddx42

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
germ cell nuclear acidic protein

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063270.1 Reference iyBomTerr1.2

    Range
    12469029..12476129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048412170.1 → XP_048268127.1  germ cell nuclear acidic protein

    UniProtKB/TrEMBL
    A0A9C6WA44

  2. XM_003393736.4 → XP_003393784.1  germ cell nuclear acidic protein

    UniProtKB/TrEMBL
    A0A9C6WA44
    Related
    ENSBTSP00005038226.1, ENSBTST00005053874.1
    Conserved Domains (2) summary
    cd01390
    Location:888 → 934
    HMGB-UBF_HMG-box; HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone ...
    pfam10263
    Location:719 → 870
    SprT-like; SprT-like family
Nucleotide Protein
Heading Accession and Version

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