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N4bp2l1 NEDD4 binding protein 2-like 1 [ Mus musculus (house mouse) ]

Gene ID: 100637, updated on 8-Feb-2025

Summary

Official Symbol
N4bp2l1provided by MGI
Official Full Name
NEDD4 binding protein 2-like 1provided by MGI
Primary source
MGI:MGI:2140872
See related
Ensembl:ENSMUSG00000041132 AllianceGenome:MGI:2140872
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2410024N18Rik; B230342M21Rik
Summary
Orthologous to human N4BP2L1 (NEDD4 binding protein 2 like 1). [provided by Alliance of Genome Resources, Feb 2025]
Expression
Ubiquitous expression in frontal lobe adult (RPKM 8.5), cortex adult (RPKM 8.5) and 28 other tissues See more
Orthologs
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Genomic context

See N4bp2l1 in Genome Data Viewer
Location:
5 G3; 5 89.55 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (150495108..150518288, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (150571643..150598678, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene breast cancer 2, early onset Neighboring gene predicted gene, 23641 Neighboring gene predicted gene 42529 Neighboring gene STARR-positive B cell enhancer ABC_E3639 Neighboring gene STARR-positive B cell enhancer mm9_chr5:151397981-151398282 Neighboring gene STARR-seq mESC enhancer starr_14956 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:151414417-151414570 Neighboring gene NEDD4 binding protein 2-like 2 Neighboring gene STARR-positive B cell enhancer ABC_E10368 Neighboring gene STARR-positive B cell enhancer ABC_E2774 Neighboring gene STARR-positive B cell enhancer ABC_E6410 Neighboring gene STARR-positive B cell enhancer ABC_E6411 Neighboring gene STARR-positive B cell enhancer ABC_E3640 Neighboring gene predicted gene, 40353 Neighboring gene STARR-seq mESC enhancer starr_14958 Neighboring gene PDS5 cohesin associated factor B Neighboring gene STARR-positive B cell enhancer ABC_E4810 Neighboring gene predicted gene, 24630

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
NEDD4-binding protein 2-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133898.4NP_598659.3  NEDD4-binding protein 2-like 1

    See identical proteins and their annotated locations for NP_598659.3

    Status: VALIDATED

    Source sequence(s)
    AK131647, BB629746, BE447039
    Consensus CDS
    CCDS19887.1
    UniProtKB/Swiss-Prot
    Q3UU88, Q3V2Q8, Q8BL78, Q8VE50
    Related
    ENSMUSP00000016279.8, ENSMUST00000016279.11
    Conserved Domains (2) summary
    pfam13671
    Location:42175
    AAA_33; AAA domain
    cl17190
    Location:42175
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    150495108..150518288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003955567.2 RNA Sequence

  2. XR_003955566.2 RNA Sequence