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ABHD14A abhydrolase domain containing 14A [ Sus scrofa (pig) ]

Gene ID: 100625665, updated on 8-Mar-2024

Summary

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Official Symbol
ABHD14Aprovided by VGNC
Official Full Name
abhydrolase domain containing 14Aprovided by VGNC
Primary source
VGNC:VGNC:84973
See related
Ensembl:ENSSSCG00000030229
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 12.6), lung (RPKM 8.6) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (34104359..34111953)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (37300540..37308301)

Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase family member 3 Neighboring gene G protein-coupled receptor 62 Neighboring gene poly(rC) binding protein 4 Neighboring gene abhydrolase domain containing 14B Neighboring gene aminoacylase 1 Neighboring gene ribosomal protein L29 Neighboring gene dual specificity phosphatase 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ABHD14A
Names
abhydrolase domain-containing protein 14A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244243.2 → NP_001231172.1  protein ABHD14A precursor

    Status: PROVISIONAL

    Source sequence(s)
    AK234347
    UniProtKB/TrEMBL
    A0A4X1SE84
    Conserved Domains (2) summary
    TIGR03695
    Location:68 → 238
    menH_SHCHC; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
    pfam12695
    Location:68 → 221
    Abhydrolase_5; Alpha/beta hydrolase family

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

    Range
    34104359..34111953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021068482.1 → XP_020924141.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  2. XM_021068480.1 → XP_020924139.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  3. XM_021068483.1 → XP_020924142.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  4. XM_021068476.1 → XP_020924135.1  protein ABHD14A isoform X1

    UniProtKB/TrEMBL
    A0A287B2H1, A0A8D0WFA4, A0A8D1BFD9, A0A8D1UTQ8
    Related
    ENSSSCP00000050444.1, ENSSSCT00000044844.3
    Conserved Domains (1) summary
    cl26327
    Location:99 → 269
    Abhydrolase_1; alpha/beta hydrolase fold

  5. XM_021068478.1 → XP_020924137.1  protein ABHD14A isoform X1

    UniProtKB/TrEMBL
    A0A287B2H1, A0A8D0WFA4, A0A8D1BFD9, A0A8D1UTQ8
    Conserved Domains (1) summary
    cl26327
    Location:99 → 269
    Abhydrolase_1; alpha/beta hydrolase fold

  6. XM_021068477.1 → XP_020924136.1  protein ABHD14A isoform X1

    UniProtKB/TrEMBL
    A0A287B2H1, A0A8D0WFA4, A0A8D1BFD9, A0A8D1UTQ8
    Conserved Domains (1) summary
    cl26327
    Location:99 → 269
    Abhydrolase_1; alpha/beta hydrolase fold

  7. XM_021068484.1 → XP_020924143.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  8. XM_021068481.1 → XP_020924140.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  9. XM_021068479.1 → XP_020924138.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Related
    ENSSSCP00000079768.1, ENSSSCT00000096635.1
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  10. XM_005669558.3 → XP_005669615.1  protein ABHD14A isoform X2

    See identical proteins and their annotated locations for XP_005669615.1

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  11. XM_021068487.1 → XP_020924146.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  12. XM_021068485.1 → XP_020924144.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  13. XM_005669556.3 → XP_005669613.1  protein ABHD14A isoform X2

    See identical proteins and their annotated locations for XP_005669613.1

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  14. XM_005669557.3 → XP_005669614.1  protein ABHD14A isoform X2

    See identical proteins and their annotated locations for XP_005669614.1

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold

  15. XM_021068486.1 → XP_020924145.1  protein ABHD14A isoform X2

    UniProtKB/TrEMBL
    A0A4X1SE84, A0A8D1Y422, A0A8W4FLI6
    Conserved Domains (1) summary
    cl26327
    Location:68 → 238
    Abhydrolase_1; alpha/beta hydrolase fold
Nucleotide Protein
Heading Accession and Version

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