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SPINK1 serine peptidase inhibitor, Kazal type 1 [ Sus scrofa (pig) ]

Gene ID: 100622575, updated on 2-Oct-2018

Summary

Gene symbol
SPINK1
Gene description
serine peptidase inhibitor, Kazal type 1
See related
Ensembl:ENSSSCG00000034511
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Also known as
PSTI
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See SPINK1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (149072652..149079529, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (155635045..155641908, complement)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene janus kinase and microtubule interacting protein 2 Neighboring gene 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like Neighboring gene uncharacterized LOC106509599 Neighboring gene secretoglobin family 3A member 2 Neighboring gene chromosome 2 C5orf46 homolog

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
negative regulation of endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
serine protease inhibitor Kazal-type 1
Names
Serine protease inhibitor Kazal-type 1
pancreatic secretory trypsin inhibitor

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    149072652..149079529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003354346.4XP_003354394.1  serine protease inhibitor Kazal-type 1

    UniProtKB/TrEMBL
    A0A287BPH0
    Related
    ENSSSCP00000058066.1, ENSSSCT00000065800.1
    Conserved Domains (1) summary
    cd01327
    Location:3579
    KAZAL_PSTI; Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the ...
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