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CARD8 caspase recruitment domain family member 8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 100614569, updated on 3-Apr-2024

Summary

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Official Symbol
CARD8provided by VGNC
Official Full Name
caspase recruitment domain family member 8provided by VGNC
Primary source
VGNC:VGNC:10941
Locus tag
CK820_G0042286
See related
Ensembl:ENSPTRG00000023499
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
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Genomic context

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Location:
chromosome: 19
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (51146579..51198673, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (51146606..51198713, complement)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene DNA ligase 1 Neighboring gene uncharacterized LOC134809116 Neighboring gene zinc finger SWIM-type containing 9 Neighboring gene caspase recruitment domain family member 8 Neighboring gene vomeronasal 1 receptor panTroV1R-ps276 pseudogene Neighboring gene uncharacterized LOC134809117 Neighboring gene zinc finger protein 114 Neighboring gene outer dynein arm docking complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-resolution comparative analysis of great ape genomes. Kronenberg ZN, et al. Science, 2018 Jun 8. PMID 29880660, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activator activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NLRP3 inflammasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase recruitment domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    51146579..51198673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009435966.5 → XP_009434241.3  caspase recruitment domain-containing protein 8 isoform X3

  2. XM_063802020.1 → XP_063658090.1  caspase recruitment domain-containing protein 8 isoform X13

  3. XM_063802018.1 → XP_063658088.1  caspase recruitment domain-containing protein 8 isoform X12

  4. XM_063802013.1 → XP_063658083.1  caspase recruitment domain-containing protein 8 isoform X5

  5. XM_063802011.1 → XP_063658081.1  caspase recruitment domain-containing protein 8 isoform X4

  6. XM_063802010.1 → XP_063658080.1  caspase recruitment domain-containing protein 8 isoform X2

  7. XM_063802015.1 → XP_063658085.1  caspase recruitment domain-containing protein 8 isoform X6

  8. XM_009435962.5 → XP_009434237.3  caspase recruitment domain-containing protein 8 isoform X1

  9. XM_063802021.1 → XP_063658091.1  caspase recruitment domain-containing protein 8 isoform X14

  10. XM_063802009.1 → XP_063658079.1  caspase recruitment domain-containing protein 8 isoform X1

  11. XM_063802014.1 → XP_063658084.1  caspase recruitment domain-containing protein 8 isoform X5

  12. XM_063802012.1 → XP_063658082.1  caspase recruitment domain-containing protein 8 isoform X4

  13. XM_063802008.1 → XP_063658078.1  caspase recruitment domain-containing protein 8 isoform X1

  14. XM_054673677.2 → XP_054529652.1  caspase recruitment domain-containing protein 8 isoform X12

  15. XM_009435971.5 → XP_009434246.3  caspase recruitment domain-containing protein 8 isoform X11

  16. XM_063802017.1 → XP_063658087.1  caspase recruitment domain-containing protein 8 isoform X8

  17. XM_063802016.1 → XP_063658086.1  caspase recruitment domain-containing protein 8 isoform X7

  18. XM_016936394.4 → XP_016791883.2  caspase recruitment domain-containing protein 8 isoform X9

  19. XM_009435970.5 → XP_009434245.3  caspase recruitment domain-containing protein 8 isoform X10

  20. XM_063802022.1 → XP_063658092.1  caspase recruitment domain-containing protein 8 isoform X15

    UniProtKB/TrEMBL
    A0A2I3S0U0, A0A2J8K1Z0, A0A6D2X749

RNA

  1. XR_010153915.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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