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GALC galactosylceramidase [ Meleagris gallopavo (turkey) ]

Gene ID: 100549468, updated on 8-Mar-2024

Summary

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Gene symbol
GALC
Gene description
galactosylceramidase
See related
Ensembl:ENSMGAG00000012983
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 5 NC_015015.2 (42019879..42056594, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 5 NC_015015.1 (44862915..44898768, complement)

Chromosome 5 - NC_015015.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104911211 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC116216689 Neighboring gene uncharacterized LOC104911212 Neighboring gene G protein-coupled receptor 65

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactocerebrosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015015.2 Reference Turkey_5.1 Primary Assembly

    Range
    42019879..42056594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003206656.4 → XP_003206704.1  galactocerebrosidase isoform X1

    UniProtKB/TrEMBL
    A0A803YI77, G1NJZ8
    Related
    ENSMGAP00000013707.2, ENSMGAT00000014622.2
    Conserved Domains (2) summary
    pfam02057
    Location:59 → 341
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:349 → 464
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  2. XM_010711799.3 → XP_010710101.1  galactocerebrosidase isoform X2

    UniProtKB/TrEMBL
    A0A803YI77
    Related
    ENSMGAP00000031475.1, ENSMGAT00000031414.1
    Conserved Domains (2) summary
    pfam02057
    Location:59 → 340
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:348 → 463
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain
Nucleotide Protein
Heading Accession and Version

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