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hoxa2b homeobox A2b [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100534423, updated on 19-Jun-2025
Gene symbol
hoxa2b
Gene description
homeobox A2b
See related
Ensembl:ENSONIG00000002966
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
all
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See hoxa2b in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
2
Annotation release Status Assembly LG Location
RS_2025_06 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG11 NC_031976.2 (18591670..18593620)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG11 NC_031976.1 (25062869..25064962, complement)

Linkage Group LG11 - NC_031976.2Genomic Context describing neighboring genes Neighboring gene homeobox A9b Neighboring gene uncharacterized LOC112848145 Neighboring gene src kinase associated phosphoprotein 2 Neighboring gene sorting nexin 10b

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparative analysis of Hox paralog group 2 gene expression during Nile tilapia (Oreochromis niloticus) embryonic development. Le Pabic P, et al. Dev Genes Evol, 2007 Dec. PMID 17924140
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
homeobox protein Hox-A2b
Names
Hox protein

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RefSeqs of Annotated Genomes: GCF_001858045.2-RS_2025_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031976.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    18591670..18593620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003454387.5 → XP_003454435.1  homeobox protein Hox-A2b

    UniProtKB/TrEMBL
    C1KFW9, I3J4C5
    Related
    ENSONIP00000003715.1, ENSONIT00000003716.2
    Conserved Domains (1) summary
    pfam00046
    Location:153 → 205
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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