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STIMATE-MUSTN1 STIMATE-MUSTN1 readthrough [ Homo sapiens (human) ]

Gene ID: 100526772, updated on 13-May-2022

Summary

Official Symbol
STIMATE-MUSTN1provided by HGNC
Official Full Name
STIMATE-MUSTN1 readthroughprovided by HGNC
Primary source
HGNC:HGNC:38834
See related
Ensembl:ENSG00000248592 AllianceGenome:HGNC:38834
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TMEM110-MUSTN1
Summary
This locus represents naturally occurring read-through transcription between the neighboring TMEM110 (transmembrane protein 110) and MUSTN1 (musculoskeletal, embryonic nuclear protein 1) genes. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Nov 2010]
Expression
Ubiquitous expression in lung (RPKM 19.9), prostate (RPKM 19.7) and 25 other tissues See more
Orthologs
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Genomic context

See STIMATE-MUSTN1 in Genome Data Viewer
Location:
3p21.1
Exon count:
10
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (52833121..52897548, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (52866132..52930551, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (52867137..52931564, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124906240 Neighboring gene inter-alpha-trypsin inhibitor heavy chain 3 Neighboring gene ITIH4 antisense RNA 1 Neighboring gene inter-alpha-trypsin inhibitor heavy chain 4 Neighboring gene musculoskeletal, embryonic nuclear protein 1 Neighboring gene STIM activating enhancer Neighboring gene microRNA 8064 Neighboring gene Scm like with four mbt domains 1 Neighboring gene Sharpr-MPRA regulatory region 7399 Neighboring gene SERPINE1 mRNA binding protein 1 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Biological insights from 108 schizophrenia-associated genetic loci.
EBI GWAS Catalog
Genome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
EBI GWAS Catalog

General gene information

Markers

Homology

Clone Names

  • DKFZp667E1121

General protein information

Preferred Names
TMEM110-MUSTN1 fusion protein
Names
TMEM110-MUSTN1 read-through transcript
TMEM110-MUSTN1 readthrough

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198974.3NP_001185903.2  TMEM110-MUSTN1 fusion protein

    Status: VALIDATED

    Source sequence(s)
    AC099667
    UniProtKB/TrEMBL
    A8MSY1
    Related
    ENSP00000422941.1, ENST00000504329.1
    Conserved Domains (2) summary
    pfam12400
    Location:100219
    DUF3661; Vaculolar membrane protein
    pfam15682
    Location:298372
    Mustang; Musculoskeletal, temporally activated-embryonic nuclear protein 1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    52833121..52897548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    52866132..52930551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)