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BMPER BMP binding endothelial regulator [ Sus scrofa (pig) ]

Gene ID: 100525197, updated on 26-Jun-2026
Official Symbol
BMPERprovided by VGNC
Official Full Name
BMP binding endothelial regulatorprovided by VGNC
Primary source
VGNC:VGNC:97902
See related
Ensembl:ENSSSCG00000016665 RGD:14048173
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in lung (RPKM 12.6), subcutaneous adipose (RPKM 5.4) and 5 other tissues See more
Orthologs
all
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Try the new Transcripts and proteins table
See BMPER in Genome Data Viewer
Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2026_06 current Sscrofa_HxYL_maternal_Yorkshire_Landrace_v2.0 (GCF_054392235.1) 18 NC_139400.1 (48328269..48575417, complement)
106 previous assembly Sscrofa11.1 (GCF_000003025.6) 18 NC_010460.4 (39417830..39664010, complement)

Chromosome 18 - NC_139400.1Genomic Context describing neighboring genes Neighboring gene neuropeptide S receptor 1 Neighboring gene uncharacterized LOC146395029 Neighboring gene uncharacterized LOC102163798 Neighboring gene uncharacterized LOC146395030 Neighboring gene uncharacterized LOC146395031 Neighboring gene uncharacterized LOC106508213 Neighboring gene uncharacterized LOC146395032 Neighboring gene uncharacterized LOC146395033 Neighboring gene Bardet-Biedl syndrome 9

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Related articles in PubMed

  1. The effect of variants in the promoter of BMPER on the intramuscular fat deposition in longissimus dorsi muscle of pigs. Liu Z, et al. Gene, 2014 Jun 1. PMID 24667095
  2. Balancing selection on a recessive lethal deletion with pleiotropic effects on two neighboring genes in the porcine genome. Derks MFL, et al. PLoS Genet, 2018 Sep. PMID 30231021, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Study in a Large White pig population show that the positive effect on growth is induced by a heterozygous loss-of-function of the BBS9 gene, associated with obesity in human and mouse. However, late fetal mortality is induced by insufficient expression of the BMPER gene located directly downstream of the deletion which affects its regulatory elements required for gene expression.
    Title: Balancing selection on a recessive lethal deletion with pleiotropic effects on two neighboring genes in the porcine genome.
  2. BMPER promoter polymorphisms have an effect on the intramuscular fat deposition in longissimus dorsi muscle content.
    Title: The effect of variants in the promoter of BMPER on the intramuscular fat deposition in longissimus dorsi muscle of pigs.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
BMP-binding endothelial regulator protein

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_054392235.1-RS_2026_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa_HxYL_maternal_Yorkshire_Landrace_v2.0

Genomic

  1. NC_139400.1 Reference Sscrofa_HxYL_maternal_Yorkshire_Landrace_v2.0

    Range
    48328269..48575417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_085005869.1 → XP_084861995.1  BMP-binding endothelial regulator protein isoform X2

  2. XM_085005875.1 → XP_084862001.1  BMP-binding endothelial regulator protein isoform X8

  3. XM_085005872.1 → XP_084861998.1  BMP-binding endothelial regulator protein isoform X6

  4. XM_085005870.1 → XP_084861996.1  BMP-binding endothelial regulator protein isoform X5

  5. XM_013990843.3 → XP_013846297.1  BMP-binding endothelial regulator protein isoform X2

    UniProtKB/TrEMBL
    A0A5G2R299
    Conserved Domains (5) summary
    pfam00093
    Location:98 → 156
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:296 → 440
    VWD; von Willebrand factor type D domain
    pfam01826
    Location:561 → 614
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:488 → 556
    C8; C8 domain
    cl17735
    Location:233 → 289
    VWC; von Willebrand factor type C domain

  6. XM_085005871.1 → XP_084861997.1  BMP-binding endothelial regulator protein isoform X6

  7. XM_013990846.3 → XP_013846300.1  BMP-binding endothelial regulator protein isoform X4

    UniProtKB/TrEMBL
    A0A5G2QA53
    Related
    ENSSSCP00000060865.1
    Conserved Domains (3) summary
    pfam00093
    Location:166 → 224
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:364 → 508
    VWD; von Willebrand factor type D domain
    cl17735
    Location:238 → 289
    VWC; von Willebrand factor type C domain

  8. XM_013990842.3 → XP_013846296.1  BMP-binding endothelial regulator protein isoform X1

    UniProtKB/TrEMBL
    A0A5G2R528, I3LAF3
    Related
    ENSSSCP00000021021.2
    Conserved Domains (5) summary
    pfam00093
    Location:166 → 224
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:364 → 508
    VWD; von Willebrand factor type D domain
    pfam01826
    Location:629 → 682
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:556 → 624
    C8; C8 domain
    cl17735
    Location:301 → 357
    VWC; von Willebrand factor type C domain

  9. XM_013990844.3 → XP_013846298.1  BMP-binding endothelial regulator protein isoform X2

    UniProtKB/TrEMBL
    A0A5G2R299
    Conserved Domains (5) summary
    pfam00093
    Location:98 → 156
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:296 → 440
    VWD; von Willebrand factor type D domain
    pfam01826
    Location:561 → 614
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:488 → 556
    C8; C8 domain
    cl17735
    Location:233 → 289
    VWC; von Willebrand factor type C domain

  10. XM_085005873.1 → XP_084861999.1  BMP-binding endothelial regulator protein isoform X6

  11. XM_085005874.1 → XP_084862000.1  BMP-binding endothelial regulator protein isoform X7

  12. XM_013990845.3 → XP_013846299.1  BMP-binding endothelial regulator protein isoform X3

    UniProtKB/TrEMBL
    A0A5G2R299
    Conserved Domains (5) summary
    pfam00093
    Location:76 → 134
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:274 → 418
    VWD; von Willebrand factor type D domain
    pfam01826
    Location:539 → 592
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:466 → 534
    C8; C8 domain
    cl17735
    Location:211 → 267
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

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