SDHC succinate dehydrogenase complex subunit C [Sus scrofa (pig)] - Gene

Summary

Official Symbol: SDHCprovided by VGNC
Official Full Name: succinate dehydrogenase complex subunit Cprovided by VGNC
Primary source: VGNC:VGNC:98852
See related: Ensembl:ENSSSCG00000030318 RGD:14143401
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as: CYBL
Expression: Ubiquitous expression in kidney (RPKM 196.8), heart (RPKM 139.3) and 8 other tissues See more
Orthologs: all
: Try the new Gene page
Try the new Transcripts and proteins table

Genomic context

Location:: chromosome: 4

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	4	NC_010446.5 (89135410..89169164, complement)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	4	NC_010446.4 (96992639..97026545, complement)

Chromosome 4 - NC_010446.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

NIB1690 (e-PCR)
- UniSTS:5395

SDHC (e-PCR)
- UniSTS:254069

Ppox (e-PCR), detects polymorphism
- UniSTS:144255

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables electron transfer activity	IEA Inferred from Electronic Annotation more info	PubMed
enables succinate dehydrogenase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone	IEA Inferred from Electronic Annotation more info	PubMed
involved_in tricarboxylic acid cycle	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: succinate dehydrogenase cytochrome b560 subunit, mitochondrial

Names: Succinate-ubiquinone oxidoreductase cytochrome B large subunit; malate dehydrogenase [quinone] cytochrome b560 subunit; succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001444462.1 → NP_001431391.1 succinate dehydrogenase cytochrome b560 subunit, mitochondrial

Status: VALIDATED

Source sequence(s)

AEMK02000022

UniProtKB/Swiss-Prot

D0VWV4

UniProtKB/TrEMBL

A0A5G2R8V0, A0A8D1ITL4

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

NC_010446.5 Reference Sscrofa11.1 Primary Assembly

Range

89135410..89169164 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_003125659.6 → XP_003125707.2 succinate dehydrogenase cytochrome b560 subunit, mitochondrial

Related

ENSSSCP00000053659.1, ENSSSCT00000045783.3

Conserved Domains (1) summary

cd03499
Location:50 → 168

SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...