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DLGAP2 DLG associated protein 2 [ Sus scrofa (pig) ]

Gene ID: 100523643, updated on 8-Mar-2024

Summary

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Official Symbol
DLGAP2provided by VGNC
Official Full Name
DLG associated protein 2provided by VGNC
Primary source
VGNC:VGNC:99711
See related
Ensembl:ENSSSCG00000015746
Gene type
protein coding
RefSeq status
INFERRED
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
19
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 15 NC_010457.5 (32600188..33267319)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 15 NC_010457.4 (37078011..37746896)

Chromosome 15 - NC_010457.5Genomic Context describing neighboring genes Neighboring gene testis development related protein Neighboring gene glutamate rich 1 Neighboring gene uncharacterized LOC106509644 Neighboring gene splicing factor, proline- and glutamine-rich-like Neighboring gene CLN8 transmembrane ER and ERGIC protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of postsynaptic neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic specialization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disks large-associated protein 2
Names
discs, large homolog-associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244586.1 → NP_001231515.1  disks large-associated protein 2

    Status: INFERRED

    Source sequence(s)
    AEMK02000098
    UniProtKB/TrEMBL
    A0A4X1SDM0, A0A5G2QVL3, A0A5G2R5T9, A0A8D0S6Y8, A0A8D1NJ08
    Conserved Domains (1) summary
    pfam03359
    Location:635 → 979
    GKAP; Guanylate-kinase-associated protein (GKAP) protein

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010457.5 Reference Sscrofa11.1 Primary Assembly

    Range
    32600188..33267319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021074622.1 → XP_020930281.1  disks large-associated protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A4X1SDM5, A0A5G2RCQ1, A0A8D0JZ61
    Conserved Domains (1) summary
    pfam03359
    Location:714 → 1058
    GKAP; Guanylate-kinase-associated protein (GKAP) protein

  2. XM_021074619.1 → XP_020930278.1  disks large-associated protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8D0JZ61, A0A8D0WB21, F1RXW1
    Related
    ENSSSCP00000016686.3, ENSSSCT00000017146.4
    Conserved Domains (1) summary
    pfam03359
    Location:715 → 1059
    GKAP; Guanylate-kinase-associated protein (GKAP) protein

  3. XM_021074620.1 → XP_020930279.1  disks large-associated protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A4X1SDM5, A0A5G2RCQ1, A0A8D0JZ61
    Related
    ENSSSCP00000074201.1, ENSSSCT00000081001.1
    Conserved Domains (1) summary
    pfam03359
    Location:714 → 1058
    GKAP; Guanylate-kinase-associated protein (GKAP) protein

  4. XM_021074621.1 → XP_020930280.1  disks large-associated protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A4X1SDM5, A0A5G2RCQ1, A0A8D0JZ61
    Conserved Domains (1) summary
    pfam03359
    Location:714 → 1058
    GKAP; Guanylate-kinase-associated protein (GKAP) protein

  5. XM_021074623.1 → XP_020930282.1  disks large-associated protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A4X1SDM0, A0A5G2QVL3, A0A5G2R5T9, A0A8D0S6Y8, A0A8D1NJ08
    Related
    ENSSSCP00000068999.1, ENSSSCT00000079760.2
    Conserved Domains (1) summary
    pfam03359
    Location:635 → 979
    GKAP; Guanylate-kinase-associated protein (GKAP) protein
Nucleotide Protein
Heading Accession and Version

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