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KRAS KRAS proto-oncogene, GTPase [ Sus scrofa (pig) ]

Gene ID: 100518251, updated on 22-Aug-2021

Summary

Official Symbol
KRASprovided by VGNC
Official Full Name
KRAS proto-oncogene, GTPaseprovided by VGNC
Primary source
VGNC:VGNC:89569
See related
Ensembl:ENSSSCG00000026969
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in lung (RPKM 12.5), spleen (RPKM 9.4) and 8 other tissues See more
Orthologs
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Genomic context

See KRAS in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (48508774..48546260)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (52229592..52270153)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106509230 Neighboring gene Ras association domain family member 8 Neighboring gene lamin tail domain containing 1 Neighboring gene electron transfer flavoprotein regulatory factor 1 Neighboring gene lymphoid-restricted membrane protein Neighboring gene dynein axonemal intermediate chain 7 Neighboring gene inositol 1,4,5-triphosphate receptor associated 2

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    48508774..48546260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003126427.5XP_003126475.1  GTPase KRas isoform X2

    See identical proteins and their annotated locations for XP_003126475.1

    UniProtKB/TrEMBL
    I3LCQ9
    Related
    ENSSSCP00000052259.2, ENSSSCT00000042185.2
    Conserved Domains (1) summary
    cd04138
    Location:3164
    H_N_K_Ras_like; Ras GTPase family containing H-Ras,N-Ras and K-Ras4A/4B
  2. XM_013993780.2XP_013849234.1  GTPase KRas isoform X1

    UniProtKB/TrEMBL
    A0A287B854
    Conserved Domains (1) summary
    cd04138
    Location:3164
    H_N_K_Ras_like; Ras GTPase family containing H-Ras,N-Ras and K-Ras4A/4B
  3. XM_005653152.3XP_005653209.1  GTPase KRas isoform X2

    See identical proteins and their annotated locations for XP_005653209.1

    UniProtKB/TrEMBL
    I3LCQ9
    Conserved Domains (1) summary
    cd04138
    Location:3164
    H_N_K_Ras_like; Ras GTPase family containing H-Ras,N-Ras and K-Ras4A/4B
  4. XM_005653151.3XP_005653208.1  GTPase KRas isoform X1

    See identical proteins and their annotated locations for XP_005653208.1

    UniProtKB/TrEMBL
    A0A287B854
    Related
    ENSSSCP00000021836.3, ENSSSCT00000025989.3
    Conserved Domains (1) summary
    cd04138
    Location:3164
    H_N_K_Ras_like; Ras GTPase family containing H-Ras,N-Ras and K-Ras4A/4B
  5. XM_013993793.2XP_013849247.1  GTPase KRas isoform X3

    Conserved Domains (1) summary
    cd04138
    Location:3164
    H_N_K_Ras_like; Ras GTPase family containing H-Ras,N-Ras and K-Ras4A/4B
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