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XPC XPC complex subunit, DNA damage recognition and repair factor [ Sus scrofa (pig) ]

Gene ID: 100514251, updated on 7-Feb-2017
Gene symbol
XPC
Gene description
XPC complex subunit, DNA damage recognition and repair factor
See related
Ensembl:ENSSSCG00000011602
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Orthologs
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
105 current Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (77746524..77794867)

Chromosome 13 - NC_010455.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102157913 Neighboring gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene transmembrane protein 43 Neighboring gene uncharacterized LOC102158783 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 4

Genomic Sequence:
NC_010455.4 Chromosome 13 Reference Sscrofa10.2 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Preferred Names
DNA repair protein complementing XP-C cells
Names
xeroderma pigmentosum group C protein

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa10.2 Primary Assembly

Genomic

  1. NC_010455.4 Reference Sscrofa10.2 Primary Assembly

    Range
    77746524..77794867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013982006.1XP_013837460.1  DNA repair protein complementing XP-C cells isoform X1

    Conserved Domains (5) summary
    smart01032
    Location:769843
    BHD_3; Rad4 beta-hairpin domain 3
    smart01030
    Location:648699
    BHD_1; Rad4 beta-hairpin domain 1
    smart01031
    Location:702761
    BHD_2; Rad4 beta-hairpin domain 2
    TIGR00605
    Location:163872
    rad4; DNA repair protein rad4
    pfam03835
    Location:547644
    Rad4; Rad4 transglutaminase-like domain
  2. XM_003132393.4XP_003132441.1  DNA repair protein complementing XP-C cells isoform X2

    UniProtKB/TrEMBL
    F1SPI2
    Related
    ENSSSCP00000012366, ENSSSCT00000012699
    Conserved Domains (5) summary
    smart01032
    Location:757831
    BHD_3; Rad4 beta-hairpin domain 3
    smart01030
    Location:636687
    BHD_1; Rad4 beta-hairpin domain 1
    smart01031
    Location:690749
    BHD_2; Rad4 beta-hairpin domain 2
    TIGR00605
    Location:151860
    rad4; DNA repair protein rad4
    pfam03835
    Location:535632
    Rad4; Rad4 transglutaminase-like domain
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