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CCDC91 coiled-coil domain containing 91 [ Sus scrofa (pig) ]

Gene ID: 100513281, updated on 1-Mar-2025
Official Symbol
CCDC91provided by VGNC
Official Full Name
coiled-coil domain containing 91provided by VGNC
Primary source
VGNC:VGNC:86329
See related
Ensembl:ENSSSCG00000024232 RGD:14265513
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 4.2), ovary (RPKM 3.9) and 8 other tissues See more
Orthologs
human mouse all
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See CCDC91 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (45138162..45525661, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (48837142..48878336)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene fatty acyl-CoA reductase 2 Neighboring gene HAUS augmin-like complex subunit 7 pseudogene Neighboring gene parathyroid hormone like hormone Neighboring gene microRNA mir-9852

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Related articles in PubMed

  1. Binding partners for the COOH-terminal appendage domains of the GGAs and gamma-adaptin. Lui WW, et al. Mol Biol Cell, 2003 Jun. PMID 12808037, Free PMC Article
  2. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
coiled-coil domain-containing protein 91

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244526.1 → NP_001231455.1  coiled-coil domain-containing protein 91

    Status: PROVISIONAL

    Source sequence(s)
    AK349131
    UniProtKB/TrEMBL
    A0A8D0U0N0
    Related
    ENSSSCP00000061101.1, ENSSSCT00000085715.1
    Conserved Domains (3) summary
    pfam07851
    Location:179 → 286
    TMPIT; TMPIT-like protein
    pfam17104
    Location:1 → 81
    DUF5102; Domain of unknown function (DUF5102)
    cl02565
    Location:263 → 381
    RGS; Regulator of G protein signaling (RGS) domain superfamily

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    45138162..45525661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021090992.1 → XP_020946651.1  coiled-coil domain-containing protein 91 isoform X2

    UniProtKB/TrEMBL
    A0A8D0ILI4, A0A8D1XTN2
    Related
    ENSSSCP00000059296.3, ENSSSCT00000052045.3
    Conserved Domains (1) summary
    cl26511
    Location:136 → 396
    Neuromodulin_N; Gap junction protein N-terminal region

  2. XM_021090995.1 → XP_020946654.1  coiled-coil domain-containing protein 91 isoform X5

    UniProtKB/TrEMBL
    A0A287BS84
    Conserved Domains (1) summary
    cl25732
    Location:134 → 412
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_021090994.1 → XP_020946653.1  coiled-coil domain-containing protein 91 isoform X4

    UniProtKB/TrEMBL
    A0A287BS84
    Conserved Domains (1) summary
    cl26511
    Location:128 → 423
    Neuromodulin_N; Gap junction protein N-terminal region

  4. XM_021090991.1 → XP_020946650.1  coiled-coil domain-containing protein 91 isoform X1

    UniProtKB/TrEMBL
    A0A5G2QGH7, A0A8D0IUP3, A0A8D0RCW9, A0A8D0U0N0
    Conserved Domains (1) summary
    cl26511
    Location:143 → 392
    Neuromodulin_N; Gap junction protein N-terminal region

  5. XM_021090990.1 → XP_020946649.1  coiled-coil domain-containing protein 91 isoform X1

    UniProtKB/TrEMBL
    A0A5G2QGH7, A0A8D0IUP3, A0A8D0RCW9, A0A8D0U0N0
    Conserved Domains (1) summary
    cl26511
    Location:143 → 392
    Neuromodulin_N; Gap junction protein N-terminal region

  6. XM_021090993.1 → XP_020946652.1  coiled-coil domain-containing protein 91 isoform X3

    UniProtKB/TrEMBL
    A0A287BS84
    Conserved Domains (1) summary
    cl26511
    Location:136 → 420
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
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