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B4GALT1 beta-1,4-galactosyltransferase 1 [ Sus scrofa (pig) ]

Gene ID: 100511655, updated on 27-Jun-2020

Summary

Official Symbol
B4GALT1provided by VGNC
Official Full Name
beta-1,4-galactosyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:96497
See related
Ensembl:ENSSSCG00000035454
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 18.8), lung (RPKM 16.7) and 8 other tissues See more
Orthologs
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Genomic context

See B4GALT1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 10 NC_010452.4 (33317295..33381285)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 10 NC_010452.3 (37574201..37635284)

Chromosome 10 - NC_010452.4Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor Kazal type 4 Neighboring gene uncharacterized LOC102167554 Neighboring gene SMU1 DNA replication regulator and spliceosomal factor Neighboring gene DnaJ heat shock protein family (Hsp40) member A1

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General protein information

Preferred Names
beta-1,4-galactosyltransferase 1
Names
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
beta 1,4 galactosyltransferase
beta1,4-galactosyltransferase-I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010452.4 Reference Sscrofa11.1 Primary Assembly

    Range
    33317295..33381285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003130680.4XP_003130728.1  beta-1,4-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A287BG16
    Related
    ENSSSCP00000055073.1, ENSSSCT00000040755.2
    Conserved Domains (1) summary
    cd00899
    Location:178396
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
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