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H2ACP1 H2AC histone family pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100509927, updated on 17-Jun-2024

Summary

Official Symbol
H2ACP1provided by HGNC
Official Full Name
H2AC histone family pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:42647
See related
Ensembl:ENSG00000223383 AllianceGenome:HGNC:42647
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HIST1H2APS6
Summary
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 13. [provided by RefSeq, Oct 2015]
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Genomic context

See H2ACP1 in Genome Data Viewer
Location:
13q13.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (36490050..36490441, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (35709576..35709968, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (37064187..37064578, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene spartin Neighboring gene SPART antisense RNA 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:36962882-36963065 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5264 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5265 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5266 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:37011626-37012825 Neighboring gene cyclin A1 Neighboring gene OCT4-H3K4me1 hESC enhancer GRCh37_chr13:37101466-37101966 Neighboring gene uncharacterized LOC124903155 Neighboring gene uncharacterized LOC124903157

Genomic regions, transcripts, and products

General gene information

Other Names

  • HIST1H2A pseudogene 6
  • histone cluster 1 H2A pseudogene 6
  • histone cluster 1, H2a pseudogene
  • histone cluster 1, H2a, pseudogene 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029174.1 

    Range
    101..492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    36490050..36490441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    35709576..35709968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)