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LINC00968 long intergenic non-protein coding RNA 968 [ Homo sapiens (human) ]

Gene ID: 100507632, updated on 17-Sep-2024

Summary

Official Symbol
LINC00968provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 968provided by HGNC
Primary source
HGNC:HGNC:48727
See related
Ensembl:ENSG00000246430 AllianceGenome:HGNC:48727
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in lung (RPKM 3.9), placenta (RPKM 1.1) and 8 other tissues See more
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Genomic context

See LINC00968 in Genome Data Viewer
Location:
8q12.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (56518318..56559823, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (56895557..56937083, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (57430877..57472382, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene PENK antisense RNA 1 Neighboring gene septin 10 pseudogene 1 Neighboring gene uncharacterized LOC101929398 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27401 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27402 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:57477049-57477224 Neighboring gene uncharacterized LOC105375850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:57497228-57497728 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:57497729-57498229 Neighboring gene ribosomal protein L37 pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038236.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012349, AK055621, BF061498, DA589236
    Related
    ENST00000499425.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    56518318..56559823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    56895557..56937083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)