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TFIP11-DT TFIP11 divergent transcript [ Homo sapiens (human) ]

Gene ID: 100507599, updated on 19-Jul-2022

Summary

Official Symbol
TFIP11-DTprovided by HGNC
Official Full Name
TFIP11 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55374
See related
Ensembl:ENSG00000261188 AllianceGenome:HGNC:55374
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 3.2), brain (RPKM 3.0) and 25 other tissues See more
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Genomic context

See TFIP11-DT in Genome Data Viewer
Location:
22q12.1
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (26512532..26514568)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (26974936..26976972)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (26908498..26910534)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene aspartate beta-hydroxylase domain containing 2 Neighboring gene HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 Neighboring gene SRR1 domain containing Neighboring gene tuftelin interacting protein 11 Neighboring gene tyrosylprotein sulfotransferase 2 Neighboring gene microRNA 548j Neighboring gene high mobility group box 1 pseudogene 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_144529.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA281860, DB267771, Z95115
    Related
    ENST00000565764.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    26512532..26514568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    26974936..26976972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)