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LINC01016 long intergenic non-protein coding RNA 1016 [ Homo sapiens (human) ]

Gene ID: 100507584, updated on 13-Feb-2019

Summary

Official Symbol
LINC01016provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1016provided by HGNC
Primary source
HGNC:HGNC:48991
See related
Ensembl:ENSG00000249346
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 9.8) See more

Genomic context

See LINC01016 in Genome Data Viewer
Location:
6p21.31
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 6 NC_000006.12 (33889511..33896907, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (33857288..33864684, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375025 Neighboring gene uncharacterized LOC105375027 Neighboring gene uncharacterized LOC105375026 Neighboring gene uncharacterized LOC107986590 Neighboring gene microRNA 7159

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038989.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK057709, AL138889, CR745530
    Related
    ENST00000506222.6

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p12 Primary Assembly

    Range
    33889511..33896907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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