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MMP25-AS1 MMP25 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100507419, updated on 13-May-2022

Summary

Official Symbol
MMP25-AS1provided by HGNC
Official Full Name
MMP25 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:51372
See related
AllianceGenome:HGNC:51372
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in spleen (RPKM 6.7), appendix (RPKM 5.0) and 23 other tissues See more
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Genomic context

See MMP25-AS1 in Genome Data Viewer
Location:
16p13.3
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (3052125..3059370, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (3078695..3085972, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (3102126..3109371, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene host cell factor C1 regulator 1 Neighboring gene THO complex subunit 6 Neighboring gene BICD family like cargo adaptor 2 Neighboring gene uncharacterized LOC100128770 Neighboring gene matrix metallopeptidase 25 Neighboring gene sialidase-like Neighboring gene interleukin 32 Neighboring gene RNA, U1 small nuclear 125, pseudogene Neighboring gene uncharacterized LOC107984896

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ42988

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_123723.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA426337, AC108134, AW204708, BQ896952

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    3052125..3059370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    3078695..3085972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)