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SNHG19 small nucleolar RNA host gene 19 [ Homo sapiens (human) ]

Gene ID: 100507303, updated on 25-Jan-2022

Summary

Official Symbol
SNHG19provided by HGNC
Official Full Name
small nucleolar RNA host gene 19provided by HGNC
Primary source
HGNC:HGNC:49574
See related
Ensembl:ENSG00000260260 AllianceGenome:HGNC:49574
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SNORD60HG
Expression
Ubiquitous expression in kidney (RPKM 18.2), prostate (RPKM 15.6) and 23 other tissues See more
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Genomic context

See SNHG19 in Genome Data Viewer
Location:
16p13.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (2154782..2155358, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (2204783..2205359, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene microRNA 3180-5 Neighboring gene RAB26, member RAS oncogene family Neighboring gene small nucleolar RNA, C/D box 60 Neighboring gene TNF receptor associated factor 7 Neighboring gene CASK interacting protein 1 Neighboring gene MTOR associated protein, LST8 homolog Neighboring gene BRICHOS domain containing 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • small nucleolar RNA host gene 19 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132114.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA535774, BM856089, DA194369
    Related
    ENST00000563192.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    2154782..2155358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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