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LINC01013 long intergenic non-protein coding RNA 1013 [ Homo sapiens (human) ]

Gene ID: 100507254, updated on 25-Oct-2022

Summary

Official Symbol
LINC01013provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1013provided by HGNC
Primary source
HGNC:HGNC:48987
See related
Ensembl:ENSG00000228495 AllianceGenome:HGNC:48987
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.0), lymph node (RPKM 0.8) and 10 other tissues See more
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Genomic context

See LINC01013 in Genome Data Viewer
Location:
6q23.2
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (132133978..132169374)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (133329009..133364404)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (132455118..132490514)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene cellular communication network factor 2 Neighboring gene microRNA 548aj-1 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 36 Neighboring gene monooxygenase DBH like 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038981.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF086187, BC040870, BG195633
    Related
    ENST00000669240.2
  2. NR_146223.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC040870

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    132133978..132169374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    133329009..133364404
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)