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TEX26-AS1 TEX26 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100507064, updated on 23-Nov-2021

Summary

Official Symbol
TEX26-AS1provided by HGNC
Official Full Name
TEX26 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:42784
See related
Ensembl:ENSG00000224743
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00447
Expression
Restricted expression toward testis (RPKM 4.4) See more
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Genomic context

See TEX26-AS1 in Genome Data Viewer
Location:
13q12.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (30882835..30932608, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (31456972..31506745, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs1515 Neighboring gene long intergenic non-protein coding RNA 398 Neighboring gene long intergenic non-protein coding RNA 545 Neighboring gene mesenteric estrogen dependent adipogenesis Neighboring gene testis expressed 26 Neighboring gene uncharacterized LOC105370145 Neighboring gene uncharacterized LOC102723392

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • TEX26 antisense RNA 1 (non-protein coding)
  • long intergenic non-protein coding RNA 447

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038287.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AK093165, AL353680, DB522937
    Related
    ENST00000585870.6
  2. NR_038288.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the 5' region and lacks two 3' exons, compared to variant 1.
    Source sequence(s)
    AK093165, AL353680, BC042736
    Related
    ENST00000411835.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    30882835..30932608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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