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MAP3K2-DT MAP3K2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 100506922, updated on 21-Mar-2023

Summary

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Official Symbol
MAP3K2-DTprovided by HGNC
Official Full Name
MAP3K2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:54088
See related
AllianceGenome:HGNC:54088
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See MAP3K2-DT in Genome Data Viewer
Location:
2q14.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (127386180..127389407)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (127821434..127824687)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 2 Neighboring gene RNA, U6 small nuclear 1147, pseudogene Neighboring gene uncharacterized LOC124906074 Neighboring gene translation initiation factor IF-2-like Neighboring gene microRNA 4783 Neighboring gene protein C, inactivator of coagulation factors Va and VIIIa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Aberrant expression of long noncoding RNAs in cumulus cells isolated from PCOS patients. Huang X, et al. J Assist Reprod Genet, 2016 Jan. PMID 26650608, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    127386180..127389407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001739698.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    127821434..127824687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071517.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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