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CHRM3-AS2 CHRM3 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100506915, updated on 13-May-2022

Summary

Official Symbol
CHRM3-AS2provided by HGNC
Official Full Name
CHRM3 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:43725
See related
Ensembl:ENSG00000233355 AllianceGenome:HGNC:43725
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in lymph node (RPKM 11.8), appendix (RPKM 7.3) and 6 other tissues See more
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Genomic context

See CHRM3-AS2 in Genome Data Viewer
Location:
1q43
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (239707126..239719119, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (239120475..239132468, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (239870426..239882419, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 1169 Neighboring gene cholinergic receptor muscarinic 3 Neighboring gene uncharacterized LOC105373225 Neighboring gene uncharacterized LOC124904567 Neighboring gene CHRM3 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • CHRM3 antisense RNA 2 (non-protein coding)

Clone Names

  • DKFZp667K2218

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103776.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL513543, CT002712
    Related
    ENST00000458325.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    239707126..239719119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    239120475..239132468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)