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TTN-AS1 TTN antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100506866, updated on 6-Sep-2021

Summary

Official Symbol
TTN-AS1provided by HGNC
Official Full Name
TTN antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44124
See related
Ensembl:ENSG00000237298
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes a non-coding RNA transcribed from the opposite strand to the titin gene. [provided by RefSeq, Aug 2016]
Expression
Broad expression in heart (RPKM 12.7), bone marrow (RPKM 4.6) and 14 other tissues See more
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Genomic context

See TTN-AS1 in Genome Data Viewer
Location:
2q31.2
Exon count:
22
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (178522827..178620217)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (179387554..179484944)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene nuclear distribution C pseudogene 2 Neighboring gene pejvakin Neighboring gene FKBP prolyl isomerase 7 Neighboring gene pleckstrin homology domain containing A3 Neighboring gene titin Neighboring gene uncharacterized LOC101927055 Neighboring gene RNA, U7 small nuclear 104 pseudogene Neighboring gene coiled-coil domain containing 141

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • TTN antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ36712, AC009948.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_051363.1 RefSeqGene

    Range
    5001..87579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_038271.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has multiple differences, compared to variant 1. These differences result in distinct 5' and 3' ends and a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC010680, AK093733, DB229458
    Related
    ENST00000456053.5
  2. NR_038272.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC009948, AC010680, BC041357
    Related
    ENST00000419746.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    178522827..178620217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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