U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01589 long intergenic non-protein coding RNA 1589 [ Homo sapiens (human) ]

Gene ID: 100506737, updated on 13-May-2022

Summary

Official Symbol
LINC01589provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1589provided by HGNC
Primary source
HGNC:HGNC:51520
See related
Ensembl:ENSG00000238120 AllianceGenome:HGNC:51520
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TCONS_00029353
Expression
Biased expression in testis (RPKM 2.5), gall bladder (RPKM 0.9) and 13 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01589 in Genome Data Viewer
Location:
22q13.31
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (45604432..45605647, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (46089164..46090379, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (46000312..46001527, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373066 Neighboring gene fibulin 1 Neighboring gene Sharpr-MPRA regulatory region 3085 Neighboring gene RNA, U6 small nuclear 1161, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131244.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC045163, BQ188486
    Related
    ENST00000422971.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    45604432..45605647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    46089164..46090379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)