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ALOX12-AS1 ALOX12 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100506713, updated on 25-Jan-2022

Summary

Official Symbol
ALOX12-AS1provided by HGNC
Official Full Name
ALOX12 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:51342
See related
Ensembl:ENSG00000215067 AllianceGenome:HGNC:51342
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in esophagus (RPKM 3.6), brain (RPKM 2.4) and 24 other tissues See more
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Genomic context

See ALOX12-AS1 in Genome Data Viewer
Location:
17p13.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (6985123..7012334, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (6888442..6915653, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene arachidonate 12-lipoxygenase pseudogene 2 Neighboring gene Spi-C transcription factor (Spi-1/PU.1 related) pseudogene Neighboring gene RNASEK-C17orf49 readthrough Neighboring gene arachidonate 12-lipoxygenase, 12S type Neighboring gene chromosome 17 open reading frame 49 Neighboring gene mir-497-195 cluster host gene Neighboring gene ribonuclease K

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
An atlas of genetic influences on human blood metabolites.
EBI GWAS Catalog

General gene information

Markers

Clone Names

  • AC027763.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040089.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK074580, BI559919
    Related
    ENST00000399541.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    6985123..7012334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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