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PXN-AS1 PXN antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100506649, updated on 12-Oct-2019

Summary

Official Symbol
PXN-AS1provided by HGNC
Official Full Name
PXN antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44123
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EyeLinc4
Expression
Ubiquitous expression in endometrium (RPKM 37.1), placenta (RPKM 12.2) and 25 other tissues See more

Genomic context

See PXN-AS1 in Genome Data Viewer
Location:
12q24.23
Exon count:
4
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (120201291..120212828)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (120639094..120650631)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene GCN1 activator of EIF2AK4 Neighboring gene microRNA 4498 Neighboring gene ribosomal protein lateral stalk subunit P0 Neighboring gene paxillin Neighboring gene ribosomal protein S20 pseudogene 31 Neighboring gene NME/NM23 nucleoside diphosphate kinase 2 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • PXN antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038924.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI767458, CV808970

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    120201291..120212828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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