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C16orf95 chromosome 16 open reading frame 95 [ Homo sapiens (human) ]

Gene ID: 100506581, updated on 25-Jan-2022

Summary

Official Symbol
C16orf95provided by HGNC
Official Full Name
chromosome 16 open reading frame 95provided by HGNC
Primary source
HGNC:HGNC:40033
See related
Ensembl:ENSG00000260456 AllianceGenome:HGNC:40033
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 33.1) and bone marrow (RPKM 1.2) See more
Orthologs
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Genomic context

See C16orf95 in Genome Data Viewer
Location:
16q24.2
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (87302814..87317392, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (87336420..87350998, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928682 Neighboring gene ribosomal protein L39 pseudogene 30 Neighboring gene C16orf95 divergent transcript Neighboring gene F-box protein 31 Neighboring gene tRNA-Met (anticodon CAT) 6-1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: FBXO31

Homology

Clone Names

  • FLJ22477, DKFZp434J1815

General protein information

Preferred Names
uncharacterized protein C16orf95

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195124.3NP_001182053.1  uncharacterized protein C16orf95 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AC010531
    Consensus CDS
    CCDS58491.1
    UniProtKB/TrEMBL
    H3BNZ7
    Related
    ENSP00000455079.2, ENST00000567970.2
    Conserved Domains (1) summary
    pfam15132
    Location:76239
    DUF4568; Domain of unknown function (DUF4568)
  2. NM_001195125.3NP_001182054.1  uncharacterized protein C16orf95 isoform 2

    See identical proteins and their annotated locations for NP_001182054.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks two alternate exons that result in a frameshift in the 3' coding region, compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AC010531, BC015536, BU839368
    Consensus CDS
    CCDS54049.1
    UniProtKB/Swiss-Prot
    Q9H693
    Related
    ENSP00000253461.4, ENST00000253461.8
    Conserved Domains (1) summary
    pfam15132
    Location:76110
    DUF4568; Domain of unknown function (DUF4568)
  3. NM_001256917.2NP_001243846.1  uncharacterized protein C16orf95 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate 5' exon and an alternate start codon, and lacks two exons that result in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (3) shares similarity in the central region but has distinct N- and C-termini and is overall shorter, compared to isoform 1.
    Source sequence(s)
    AB371437, AC010531, BC015536, BI460222, BU839368, DA871621
    Consensus CDS
    CCDS73921.1
    UniProtKB/TrEMBL
    A0A087X224
    Related
    ENSP00000484646.1, ENST00000618367.4
    Conserved Domains (1) summary
    pfam15132
    Location:5495
    DUF4568; Domain of unknown function (DUF4568)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    87302814..87317392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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