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LINC01082 long intergenic non-protein coding RNA 1082 [ Homo sapiens (human) ]

Gene ID: 100506542, updated on 25-Jan-2022

Summary

Official Symbol
LINC01082provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1082provided by HGNC
Primary source
HGNC:HGNC:49125
See related
Ensembl:ENSG00000269186 MIM:614978; AllianceGenome:HGNC:49125
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TCONS_00024492
Expression
Biased expression in colon (RPKM 7.1), urinary bladder (RPKM 5.4) and 9 other tissues See more
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Genomic context

See LINC01082 in Genome Data Viewer
Location:
16q24.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (86196181..86199720)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (86229787..86233326)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371389 Neighboring gene uncharacterized LOC105376778 Neighboring gene uncharacterized LOC101928582 Neighboring gene long intergenic non-protein coding RNA 1081 Neighboring gene long intergenic non-protein coding RNA 2135

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • lncRNA TCONS_00024492
  • long noncoding RNA TCONS_00024492

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103859.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA399680, AI676062, BP423579
    Related
    ENST00000601250.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    86196181..86199720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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