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LINC01503 long intergenic non-protein coding RNA 1503 [ Homo sapiens (human) ]

Gene ID: 100506119, updated on 14-Dec-2021

Summary

Official Symbol
LINC01503provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1503provided by HGNC
Primary source
HGNC:HGNC:51184
See related
Ensembl:ENSG00000233901
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in urinary bladder (RPKM 4.9), skin (RPKM 4.5) and 21 other tissues See more
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Genomic context

See LINC01503 in Genome Data Viewer
Location:
9q34.11
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (129336923..129347477)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (132099202..132109756)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987133 Neighboring gene long intergenic non-protein coding RNA 2913 Neighboring gene uncharacterized LOC107987038 Neighboring gene RNA, 7SL, cytoplasmic 159, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • hCG2021613
  • lnc-PPP2R4-5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120685.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    BF432137, DA958985
    Related
    ENST00000660635.1
  2. NR_120686.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site at an internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL353803
    Related
    ENST00000444125.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    129336923..129347477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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