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LINC02275 long intergenic non-protein coding RNA 2275 [ Homo sapiens (human) ]

Gene ID: 100506085, updated on 14-Dec-2021

Summary

Official Symbol
LINC02275provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2275provided by HGNC
Primary source
HGNC:HGNC:53191
See related
Ensembl:ENSG00000248319
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02275 in Genome Data Viewer
Location:
4q33
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (169917761..169975902, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (170838912..170897053, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 3 pseudogene 3 Neighboring gene chloride nucleotide-sensitive channel 1A pseudogene Neighboring gene uncharacterized LOC105377530 Neighboring gene microfibril associated protein 3 like Neighboring gene uncharacterized LOC101928198

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
A genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
EBI GWAS Catalog
Common genetic variants associated with cognitive performance identified using the proxy-phenotype method.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037878.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079768, AC084866, AK125042
    Related
    ENST00000508313.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    169917761..169975902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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