U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100506071 uncharacterized LOC100506071 [ Homo sapiens (human) ]

Gene ID: 100506071, updated on 17-Jun-2024

Summary

Gene symbol
LOC100506071
Gene description
uncharacterized LOC100506071
See related
Ensembl:ENSG00000258525
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in pancreas (RPKM 43.9), prostate (RPKM 14.3) and 2 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC100506071 in Genome Data Viewer
Location:
14q12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (30876179..30889808, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (25073664..25087293, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (31345385..31359014, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ribosomal protein L12 pseudogene 5 Neighboring gene ribosomal protein L27 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5648 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5649 Neighboring gene cochlin Neighboring gene striatin 3 Neighboring gene HIG1 hypoxia inducible domain family member 1A pseudogene 17 Neighboring gene microRNA 624

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038356.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049830
    Related
    ENST00000555108.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    30876179..30889808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    25073664..25087293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)