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LRRC72 leucine rich repeat containing 72 [ Homo sapiens (human) ]

Gene ID: 100506049, updated on 23-Nov-2021

Summary

Official Symbol
LRRC72provided by HGNC
Official Full Name
leucine rich repeat containing 72provided by HGNC
Primary source
HGNC:HGNC:42972
See related
Ensembl:ENSG00000205858
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAP279; CFAP279
Expression
Restricted expression toward testis (RPKM 1.2) See more
Orthologs
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Genomic context

See LRRC72 in Genome Data Viewer
Location:
7p21.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (16526825..16581568)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (16566450..16621193)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CDP-L-ribitol pyrophosphorylase A Neighboring gene CRPPA antisense RNA 1 Neighboring gene uncharacterized LOC105375168 Neighboring gene sclerostin domain containing 1 Neighboring gene uncharacterized LOC105375169 Neighboring gene ataxin 2 like pseudogene Neighboring gene ankyrin repeat and MYND domain containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

General protein information

Preferred Names
leucine-rich repeat-containing protein 72
Names
leucine-rich repeat-containing protein ENSP00000371558

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195280.2NP_001182209.1  leucine-rich repeat-containing protein 72

    See identical proteins and their annotated locations for NP_001182209.1

    Status: VALIDATED

    Source sequence(s)
    AC005014, AW341438, BF222754, DT932641, DT932642
    Consensus CDS
    CCDS56464.1
    UniProtKB/Swiss-Prot
    A6NJI9
    Related
    ENSP00000384971.2, ENST00000401542.3
    Conserved Domains (3) summary
    sd00031
    Location:4968
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:91128
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:91149
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    16526825..16581568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011515057.1XP_011513359.1  leucine-rich repeat-containing protein 72 isoform X1

    Conserved Domains (3) summary
    sd00031
    Location:4968
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:91128
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:91149
    LRR_8; Leucine rich repeat
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