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LOC100505841 zinc finger protein 474-like [ Homo sapiens (human) ]

Gene ID: 100505841, updated on 26-Oct-2022

Summary

Gene symbol
LOC100505841
Gene description
zinc finger protein 474-like
See related
Ensembl:ENSG00000250803
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 9.3) See more
Orthologs
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Genomic context

See LOC100505841 in Genome Data Viewer
Location:
5q23.2
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (122160176..122182658)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (122677032..122699514)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (121495871..121518353)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 13182 Neighboring gene ZNF474 antisense RNA 1 Neighboring gene zinc finger protein 474 Neighboring gene synuclein alpha interacting protein Neighboring gene ancient vomeronasal 1 receptor pseudogene Neighboring gene uncharacterized LOC107986446 Neighboring gene uncharacterized LOC153163

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

General protein information

Preferred Names
uncharacterized protein LOC100505841

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195535.4NP_001182464.2  uncharacterized protein LOC100505841

    Status: VALIDATED

    Source sequence(s)
    AC010255
    Consensus CDS
    CCDS93768.1
    UniProtKB/TrEMBL
    A0A1B0GTH9
    Related
    ENSP00000489710.1, ENST00000509403.7

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    122160176..122182658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    122677032..122699514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)