Format

Send to:

Choose Destination

PBX1-AS1 PBX1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100505795, updated on 23-Nov-2021

Summary

Official Symbol
PBX1-AS1provided by HGNC
Official Full Name
PBX1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40425
See related
Ensembl:ENSG00000233693
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PBX1-AS1 in Genome Data Viewer
Location:
1q23.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (164769116..164774641, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (164738353..164743878, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene PBX homeobox 1 Neighboring gene Sharpr-MPRA regulatory region 1770 Neighboring gene PBX1 intron CAGE-defined high expression enhancer Neighboring gene VISTA enhancer hs1191 Neighboring gene uncharacterized LOC107985451

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038072.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL357568
    Related
    ENST00000421530.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    164769116..164774641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center