Format

Send to:

Choose Destination

MHENCR melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 [ Homo sapiens (human) ]

Gene ID: 100505771, updated on 14-Dec-2021

Summary

Official Symbol
MHENCRprovided by HGNC
Official Full Name
melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489provided by HGNC
Primary source
HGNC:HGNC:53110
See related
Ensembl:ENSG00000232442
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in spleen (RPKM 10.9), thyroid (RPKM 8.8) and 25 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See MHENCR in Genome Data Viewer
Location:
20q13.33
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (63627235..63628824)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (62258588..62260177)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene helicase with zinc finger 2 Neighboring gene glucocorticoid modulatory element binding protein 2 Neighboring gene Sharpr-MPRA regulatory region 12780 Neighboring gene stathmin 3 Neighboring gene uncharacterized LOC105372726

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • CTD-3184A7.4
  • melanoma highly expressed noncoding RNA

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132417.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AW779286, BQ220589
    Related
    ENST00000449500.2
  2. NR_132418.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the 3' region, compared to variant 1.
    Source sequence(s)
    BM263220, BQ220589, BU500705
    Related
    ENST00000411579.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    63627235..63628824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center