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SPDYE18 speedy/RINGO cell cycle regulator family member E18 [ Homo sapiens (human) ]

Gene ID: 100505767, updated on 4-Nov-2022

Summary

Official Symbol
SPDYE18provided by HGNC
Official Full Name
speedy/RINGO cell cycle regulator family member E18provided by HGNC
Primary source
HGNC:HGNC:51514
See related
Ensembl:ENSG00000205482 AllianceGenome:HGNC:51514
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 7.2), thyroid (RPKM 1.9) and 23 other tissues See more
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Genomic context

See SPDYE18 in Genome Data Viewer
Location:
7q11.23
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (77050391..77062558, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (78301438..78313660, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (76679708..76691875, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene Neighboring gene Sharpr-MPRA regulatory region 3059 Neighboring gene PMS1 homolog 2, mismatch repair system component pseudogene 11 Neighboring gene speedy/RINGO cell cycle regulator family member E17 Neighboring gene PMS1 homolog 2, mismatch repair system component pseudogene 9 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 pseudogene Neighboring gene family with sequence similarity 185, member A pseudogene Neighboring gene ribosomal protein L7a pseudogene 43

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
speedy protein E18
Names
Speedy protein E18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001351348.1NP_001338277.1  speedy protein E18 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC007000
    Conserved Domains (1) summary
    pfam11357
    Location:117271
    Spy1; Cell cycle regulatory protein
  2. NM_001394953.1NP_001381882.1  speedy protein E18 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC007000
    Consensus CDS
    CCDS94131.1
    UniProtKB/Swiss-Prot
    P0DV79
    UniProtKB/TrEMBL
    A0A8I5KS96
    Related
    ENSP00000509550.1, ENST00000510091.4

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    77050391..77062558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    78301438..78313660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)