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PRMT5-AS1 PRMT5 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100505758, updated on 23-Nov-2021

Summary

Official Symbol
PRMT5-AS1provided by HGNC
Official Full Name
PRMT5 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40533
See related
Ensembl:ENSG00000237054
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 9.4), thyroid (RPKM 5.7) and 25 other tissues See more
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Genomic context

See PRMT5-AS1 in Genome Data Viewer
Location:
14q11.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (22919456..22923407)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (23388665..23392616)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene RRAD and GEM like GTPase 2 Neighboring gene RNA binding motif protein 23 Neighboring gene protein arginine methyltransferase 5 Neighboring gene tRNA-Arg (anticodon ACG) 1-3 Neighboring gene PRMT5 divergent transcript Neighboring gene HAUS augmin like complex subunit 4 Neighboring gene microRNA 4707

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • PRMT5 antisense RNA 1 (non-protein coding)

Clone Names

  • AL132780.10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120599.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AK093277, AL132780
    Related
    ENST00000424245.3
  2. NR_120600.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the 3' exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL132780

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    22919456..22923407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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