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NAPA-AS1 NAPA antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100505681, updated on 23-Jul-2022

Summary

Official Symbol
NAPA-AS1provided by HGNC
Official Full Name
NAPA antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44118
See related
AllianceGenome:HGNC:44118
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in esophagus (RPKM 8.0), thyroid (RPKM 7.3) and 25 other tissues See more
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Genomic context

See NAPA-AS1 in Genome Data Viewer
Location:
19q13.32-q13.33
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (47484282..47501597)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (50315143..50332416)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (47987539..48004854)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene hESC enhancers GRCh37_chr19:47931091-47931659 and GRCh37_chr19:47931660-47932227 Neighboring gene Sharpr-MPRA regulatory region 169 Neighboring gene solute carrier family 8 member A2 Neighboring gene kaptin, actin binding protein Neighboring gene NSF attachment protein alpha Neighboring gene zinc finger protein 541 Neighboring gene RNA, 7SL, cytoplasmic 322, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • NAPA antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038452.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073548, AK057858, BG035979

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    47484282..47501597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    50315143..50332416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)