U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC00967 long intergenic non-protein coding RNA 967 [ Homo sapiens (human) ]

Gene ID: 100505659, updated on 10-Oct-2023

Summary

Official Symbol
LINC00967provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 967provided by HGNC
Primary source
HGNC:HGNC:48725
See related
Ensembl:ENSG00000253138 AllianceGenome:HGNC:48725
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward placenta (RPKM 4.9) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC00967 in Genome Data Viewer
Location:
8q13.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (66192114..66197319)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (66617796..66623001)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (67104349..67109554)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27476 Neighboring gene uncharacterized LOC112268029 Neighboring gene uncharacterized LOC124901954 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:67098699-67099309 Neighboring gene uncharacterized LOC102724687 Neighboring gene corticotropin releasing hormone Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:67140301-67141126 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:67141127-67141950 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:67164075-67164914 Neighboring gene MPRA-validated peak7057 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27477 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27478 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19252 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27479 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27480 Neighboring gene RRS1 divergent transcript Neighboring gene ribosome biogenesis regulator 1 homolog

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039979.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090195, BX360434, BX389854, DB379123
    Related
    ENST00000518035.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    66192114..66197319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    66617796..66623001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)