Format

Send to:

Choose Destination

TEX48 testis expressed 48 [ Homo sapiens (human) ]

Gene ID: 100505478, updated on 23-Nov-2021

Summary

Official Symbol
TEX48provided by HGNC
Official Full Name
testis expressed 48provided by HGNC
Primary source
HGNC:HGNC:52393
See related
Ensembl:ENSG00000230601
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 6.4) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TEX48 in Genome Data Viewer
Location:
9q32
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (114666434..114682192, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (117428714..117444472, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene transmembrane protein 268 Neighboring gene uncharacterized LOC107987121 Neighboring gene testis expressed 53 Neighboring gene uncharacterized LOC105376231 Neighboring gene TNF superfamily member 15

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
testis-expressed protein 48

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199233.2NP_001186162.1  testis-expressed protein 48 isoform 1

    See identical proteins and their annotated locations for NP_001186162.1

    Status: VALIDATED

    Source sequence(s)
    AL160275
    Consensus CDS
    CCDS83406.1
    UniProtKB/Swiss-Prot
    A0A1B0GUV7
    Related
    ENSP00000490263.1, ENST00000436752.3
  2. NM_001371884.1NP_001358813.1  testis-expressed protein 48 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL160275

RNA

  1. NR_133056.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL160275
  2. NR_144867.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL160275
    Related
    ENST00000612244.5
  3. NR_163988.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL160275
  4. NR_163989.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL160275

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    114666434..114682192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center