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Arhgap33os Rho GTPase activating protein 33, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 100504207, updated on 8-Feb-2024

Summary

Official Symbol
Arhgap33osprovided by MGI
Official Full Name
Rho GTPase activating protein 33, opposite strandprovided by MGI
Primary source
MGI:MGI:2685928
See related
Ensembl:ENSMUSG00000062132 AllianceGenome:MGI:2685928
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1082
Expression
Biased expression in testis adult (RPKM 14.6) and kidney adult (RPKM 0.4) See more
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Genomic context

See Arhgap33os in Genome Data Viewer
Location:
7 B1; 7 18.4 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (30214547..30221618)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (30515122..30522193)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene nephrosis 1, nephrin Neighboring gene ribosomal protein S12, pseudogene 4 Neighboring gene proline dehydrogenase (oxidase) 2 Neighboring gene Rho GTPase activating protein 33 Neighboring gene STARR-positive B cell enhancer ABC_E1731 Neighboring gene proline and serine rich 3 Neighboring gene STARR-positive B cell enhancer ABC_E9289

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Other Names

  • Arhgap33 opposite strand transcript

Clone Names

  • MGC86006, AC167970.9

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in attachment of spindle microtubules to kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in biological_process ND
No biological Data available
more info
 
involved_in intercellular bridge organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in male meiotic nuclear division IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic sister chromatid separation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic spindle assembly checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
is_active_in intercellular bridge IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in midbody IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036630.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC167970, BC065044
    Related
    ENSMUST00000124276.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    30214547..30221618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004161.1: Suppressed sequence

    Description
    NM_001004161.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.